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Machine Learning for Biomedical Informatics

Our interdisciplinary group is headed by Prof. Dr. Dominik Heider. The main focus of our research is set on the development of computational solutions from the field of Machine Learning for solving biomedical problems, e.g., algorithms for predicting drug resistance of pathogens or for modeling of diseases. Thereby addressing questions of how to embed and integrate multi-modal medical data, how to make the prediction models explainable, how to derive causal relationships, and how to make these models privacy-preserving.

In another main part of our research, we aim to develop new methods and algorithms for analyzing omics data, e.g., (meta-)genomics and (meta-)transcriptomics or gene expression, as well as genome assembly and functional annotation. 

Head of the working group
Prof. Dr. Dominik Heider

Advice & Cooperation

We offer help and service for omics data analysis as well as for machine learning data analytics.

Registration for counseling can be done either by e-mail or by phone.

Dr. rer. nat. Marius Welzel
Phone: 0251 / 83 – 5 82 14

Completed Projects

MalariAI

Analysis of human AMP memory with artificial intelligence as a strategy against microbial resistance

Diffusible Signals - How do bacteria communicate with human inflammatory cells?

Deep-Legion - Detection of virulence factor protein domains in Legionella using deep autoencoders

Single cell RNA and single cell ATAC sequencing in pediatric brain tumors

Deep Insight: Integrating germline and somatic genetic profiles through machine learning to understand esophageal cancer etiology

Virtual Doc

Identification of new antibiotic resistance mechanisms using deep learning

MOSLA - Molecular Storage for Long-Term Archiving

FeatureCloud: The new, privacy-friendly platform for federated machine learning in healthcare

Deep-iAMR – Identification of new antimicrobial resistance targets using high-throughput deep learning methods

Application of modern information technologies in the neurorehabilitation of patients with acquired brain injury

ISOB – In silico identification and optimization platform for biologics

Systems biology-driven machine learning in pharmacogenomics to predict antidepressant non-remission in late-life depression

VerPlaPoS - Consumer Reactions to Plastic and How to Avoid It at the Point of Sale

Blue-green algae research project

Validity and Reliability of Importance Analyzes - identification of biomarkers for cardiovascular diseases

Authentication and Tracking of Medical Cannabis with DNA Watermarking

Developing Novel Reliable Low Cost HIV Prognostics

Influence of the liver on the development of a heart attack – the close interaction between the liver and the heart